Review




Structured Review

InterPro Inc interproscan web tools
Interproscan Web Tools, supplied by InterPro Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/interproscan+tool/interproscan+web+service/pm40230310-57-10-14
Average 90 stars, based on 1 article reviews
interproscan web tools - by Bioz Stars, 2026-11
90/100 stars

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Related Articles

other:

Article Title: In silico comparative analysis of cestode and human NPC1 provides insights for ezetimibe repurposing to visceral cestodiases treatment
Article Snippet: The InterProScan tool from the InterPro online server ( ebi.ac.uk/interpro ) was used to analyze the domain composition of NPC1 sequences from E. multilocularis, H. microstoma and H. sapiens , taken as references in this step.

Article Title: Comparison of Whey N-Glycoproteins in Yak Colostrum and Mature Milk Based on 4D Label-Free Technology.
Article Snippet: Whey proteins are N-glycosylated proteins that play important roles in a variety of biological processes including immune defense.. However, the N-glycosylation of yak colostrum (YC) and mature milk (YM) whey proteins is unknown.. Therefore, this study systematically compared and analyzed YC and YM whey N-glycoproteomes using the 4D label-free technique.

Article Title: SEGT-GO: a graph transformer method based on PPI serialization and explanatory artificial intelligence for protein function prediction.
Article Snippet: The InterProScan [29] tool can generate a d-dimensional vectorized non-redundant protein sequence feature based on InterPro, known as InterPro Feature.

Functional Assay:

Article Title: Chromosome-level genome assembly of the cereal cyst nematode Heterodera flipjevi
Article Snippet: The predicted protein-coding genes in H. filipjevi genome were functionally annotated based on homologous searches against databases of SwissProt , NR database (NCBI) , Gene Ontology , InterPro and KEGG pathway . .. Notably, InterproScan tool in coordination with InterPro database were applied to predict protein function based on the conserved protein domains and functional sites. ..

Article Title: A chromosome-level genome assembly of the Echiura Urechis unicinctus
Article Snippet: For functional annotation, the predicted protein sequences were aligned against SwissProt , NCBI’s non-redundant protein sequence databases (NR), InterPro , Gene Ontology (GO) , Kyoto Encyclopedia of Genes and Genomes (KEGG) and Pfam protein databases by BLASTP (E-value ≤ 1E-05) with the matched rates of 74.1%, 93.2%, 74.2%, 98.5%, 90.6%, and 67.8%, respectively (Table ). .. InterproScan tool in coordination with InterPro database was applied to predict protein function based on the conserved protein domains and functional sites. ..

Article Title: Chromosome-level genome assembly of the cashmere goat
Article Snippet: We annotated the function of protein-coding genes within the cashmere goat genome using the SwissProt , KEGG pathway , NR (from NCBI), and InterPro databases, leveraging a homologous searching method. .. Notably, we obtained Pfam domain and Gene Ontology (GO) information from the InterPro database and predicted these using the InterProScan tool , which is based on conserved protein domains and functional sites. ..

Sequencing:

Article Title: SEGT-GO: a graph transformer method based on PPI serialization and explanatory artificial intelligence for protein function prediction
Article Snippet: InterPro feature By integrating more than a dozen different protein feature databases such as CATH-Gene3D [ ], CDD [ ] and Pfam [ ], InterPro has become a leading resource pool for protein families, domains, and functional sites. .. The InterProScan [ ] tool can generate a d -dimensional vectorized non-redundant protein sequence feature based on InterPro, known as InterPro Feature. .. We extract protein sequence data from UniProtKB to generate InterPro Features [ ].

Article Title: Complete genome characterization of cacao leafroll virus, a newly described cacao-infecting polerovirus.
Article Snippet: The cacao tree, Theobroma cacao (L.) (family Malvaceae), is an economically important tree crop that is cultivated in tropical regions and from which the beans are harvested to produce high-value confectionaries and other products [1].. A number of plant viruses cause diseases in cacao trees that limit crop production where cacao is grown, and recently, at least three have been identified in cacao germplasm collections [2–7].. The family Solemoviridae includes four genera of plant viruses: Enamovirus, Polemovirus, Polerovirus, and Sobemovirus [8].



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